(log file starts at Wed Sep 18 03:06:56 UTC 2024) [harvester info] --> Processing foliatools (https://github.com/proycon/foliatools) [Wed Sep 18 03:06:56 UTC 2024] [harvester info] Git updating cached clone of https://github.com/proycon/foliatools... [harvester info] Found release v2.5.7 [harvester info] Using 'v2.5.7' [harvester info] Git reference: v2.5.7 [harvester info] Scanning directory /tmp/codemeta-harvester.cache/foliatools for harvestable resources... [harvester info] found codemeta-harvest.json for foliatools (md5sum aaf074cd20239cb6f4955ff9e5fd242f); values in here take precendence over (override) those in later detection stages [harvester info] found python setup for foliatools, converting to codemeta [harvester info] Looking for license.... [harvester info] Found license GPL-3.0-only [harvester info] Getting contributors from git... [harvester info] No git contributors found [harvester info] Getting top contributor from git... [harvester info] Git top contributor will be assigned as author (and maintainer) if none are found in the metadata [harvester info] Extracting last and first commit date from git log.... [harvester info] Date created: 2011-01-14T12:22:40Z+0000, date modified: 2024-05-14T12:13:07Z+0200 [harvester info] Querying Github/GitLab API (https://github.com/proycon/foliatools) [harvester info] Adding URL for found README: README.rst [harvester info] Found releaseNotes [harvester info] Querying Zenodo API for DOI (access token provided)... [harvester info] Found DOI https://doi.org/10.5281/zenodo.12759105 [harvester info] Converting README.rst to README.md [harvester info] Looking for TRL information in README.md... [harvester info] Looking for repostatus information in README.md... [harvester info] Found repostatus https://www.repostatus.org/#active [harvester info] Looking for continuous integration information in README.md... [harvester info] Found CI https://github.com/proycon/foliatools/actions/workflows/foliatools.yml [harvester info] Looking for documentation links in README.md... [harvester info] Scraping title from https://folia.readthedocs.io/en/latest/form.html [harvester info] Found documentation at https://folia.readthedocs.io/en/latest/form.html : "name": "Form — FoLiA: Format for Linguistic Annotation v2.0 (rev 9.0) documentation", [harvester info] Falling back to git tag (v2.5.7) if no version number is specified... [harvester info] Inferring repostatus information from git activity (used only as a fallback if not explicitly provided)... [harvester info] Inferred repostatus https://www.repostatus.org/#active [harvester info] Looking for repostatus information in README.rst in master branch... [harvester info] Found repostatus (master branch) https://www.repostatus.org/#active [harvester info] Setting group FoLiA [harvester info] Reconciliating: codemetapy --baseuri https://tools.clariah.nl --baseuri https://tools.clariah.nl --includecontext --addcontext https://w3id.org/nwo-research-fields --addcontext https://w3id.org/research-technology-readiness-levels --addcontextgraph https://vocabs.dariah.eu/rest/v1/tadirah/data?format=text/turtle --trl --identifier "foliatools" --codeRepository "https://github.com/proycon/foliatools" --validate /etc/software.ttl --released --enrich --textv "Please consult the CLARIAH Software Metadata Requirements at https://github.com/CLARIAH/clariah-plus/blob/main/requirements/software-metadata-requirements.md for an in-depth explanation of any found problems" -O /tmp/out/foliatools.codemeta.json /tmp/codemeta-harvester.cache//tmp/99-version.foliatools.codemeta.json /tmp/codemeta-harvester.cache//tmp/99-repostatus.foliatools.codemeta.json /tmp/codemeta-harvester.cache//tmp/90-authors.foliatools.codemeta.json /tmp/codemeta-harvester.cache//tmp/50-documentation.foliatools.codemeta.json /tmp/codemeta-harvester.cache//tmp/43-releasenotes.foliatools.codemeta.json /tmp/codemeta-harvester.cache//tmp/41-readme.foliatools.codemeta.json /tmp/codemeta-harvester.cache//tmp/40-gitapi.foliatools.codemeta.json /tmp/codemeta-harvester.cache//tmp/39-gitdate.foliatools.codemeta.json /tmp/codemeta-harvester.cache//tmp/29-license.foliatools.codemeta.json /tmp/codemeta-harvester.cache//tmp/20-python.foliatools.codemeta.json /tmp/codemeta-harvester.cache//tmp/12-ci.foliatools.codemeta.json /tmp/codemeta-harvester.cache//tmp/11-repostatus.foliatools.codemeta.json /tmp/codemeta-harvester.cache//tmp/10-harvest.foliatools.codemeta.json /tmp/codemeta-harvester.cache//tmp/05-repostatus.foliatools.codemeta.json /tmp/codemeta-harvester.cache//tmp/05-doi.foliatools.codemeta.json /tmp/codemeta-harvester.cache//tmp/04-applicationSuite.foliatools.codemeta.json -- begin log -- Passed 16 files/sources but specified 0 input types! Automatically guessing types... Detected input types: [('/tmp/codemeta-harvester.cache//tmp/99-version.foliatools.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/99-repostatus.foliatools.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/90-authors.foliatools.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/50-documentation.foliatools.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/43-releasenotes.foliatools.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/41-readme.foliatools.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/40-gitapi.foliatools.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/39-gitdate.foliatools.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/29-license.foliatools.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/20-python.foliatools.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/12-ci.foliatools.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/11-repostatus.foliatools.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/10-harvest.foliatools.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/05-repostatus.foliatools.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/05-doi.foliatools.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/04-applicationSuite.foliatools.codemeta.json', 'json')] Adding to contextgraph: /tmp/turtle Initial URI automatically generated, may be overriden later: https://tools.clariah.nl/foliatools Processing source #1 of 16 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/99-version.foliatools.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/foliatools [CODEMETA COMPOSITION (https://tools.clariah.nl/foliatools)] processed 1 new triples, total is now 2 Processing source #2 of 16 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/99-repostatus.foliatools.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/foliatools [CODEMETA COMPOSITION (https://tools.clariah.nl/foliatools)] processed 1 new triples, total is now 3 Processing source #3 of 16 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/90-authors.foliatools.codemeta.json Found main resource with URI https://tools.clariah.nl/foliatools.topcontributor/snapshot Injected (possibly temporary) URI https://tools.clariah.nl/foliatools [CODEMETA COMPOSITION (https://tools.clariah.nl/foliatools)] processed 1 new triples, total is now 3 Processing source #4 of 16 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/50-documentation.foliatools.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/foliatools [CODEMETA COMPOSITION (https://tools.clariah.nl/foliatools)] processed 4 new triples, total is now 7 Processing source #5 of 16 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/43-releasenotes.foliatools.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/foliatools [CODEMETA COMPOSITION (https://tools.clariah.nl/foliatools)] processed 2 new triples, total is now 9 Processing source #6 of 16 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/41-readme.foliatools.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/foliatools [CODEMETA COMPOSITION (https://tools.clariah.nl/foliatools)] processed 1 new triples, total is now 10 Processing source #7 of 16 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/40-gitapi.foliatools.codemeta.json Found main resource with URI https://tools.clariah.nl/foliatools/snapshot Injected (possibly temporary) URI https://tools.clariah.nl/foliatools [CODEMETA COMPOSITION (https://tools.clariah.nl/foliatools)] processed 28 new triples, total is now 37 Processing source #8 of 16 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/39-gitdate.foliatools.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/foliatools [CODEMETA COMPOSITION (https://tools.clariah.nl/foliatools)] overriding old http://schema.org/dateCreated (2018-09-06T14:37:40Z -> 2011-01-14T12:22:40Z+0000) [CODEMETA COMPOSITION (https://tools.clariah.nl/foliatools)] overriding old http://schema.org/dateModified (2024-07-17T11:54:36Z -> 2024-05-14T12:13:07Z+0200) [CODEMETA COMPOSITION (https://tools.clariah.nl/foliatools)] processed 2 new triples, total is now 37 Processing source #9 of 16 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/29-license.foliatools.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/foliatools [CODEMETA COMPOSITION (https://tools.clariah.nl/foliatools)] overriding old http://schema.org/license (http://spdx.org/licenses/GPL-3.0-only -> GPL-3.0-only) [CODEMETA CORRECTION (https://tools.clariah.nl/foliatools)] automatically converting license to spdx URI [CODEMETA COMPOSITION (https://tools.clariah.nl/foliatools)] processed 1 new triples, total is now 37 Processing source #10 of 16 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/20-python.foliatools.codemeta.json Found main resource with URI https://tools.clariah.nl/folia-tools/2.5.7 Injected (possibly temporary) URI https://tools.clariah.nl/foliatools [CODEMETA COMPOSITION (folia-tools)] overriding old http://schema.org/author (https://tools.clariah.nl/stub/H-434f47ae94ddac9e -> https://tools.clariah.nl/stub/H-1e80dd97f9c4310a) [CODEMETA COMPOSITION (folia-tools)] overriding old http://schema.org/description (A number of command-line tools for working with FoLiA (Format for Linguistic Annotation). Includes validators, converters, visualisers, and more. -> FoLiA-tools contains various Python-based command line tools for working with FoLiA XML (Format for Linguistic Annotation)) [CODEMETA COMPOSITION (folia-tools)] overriding old http://schema.org/keywords (converters -> annotation) [CODEMETA COMPOSITION (folia-tools)] overriding old http://schema.org/keywords (computational-linguistics -> annotation) [CODEMETA COMPOSITION (folia-tools)] overriding old http://schema.org/keywords (conllu -> annotation) [CODEMETA COMPOSITION (folia-tools)] overriding old http://schema.org/keywords (clarin -> annotation) [CODEMETA COMPOSITION (folia-tools)] overriding old http://schema.org/keywords (clariah -> annotation) [CODEMETA COMPOSITION (folia-tools)] overriding old http://schema.org/name (foliatools -> FoLiA-tools) [CODEMETA COMPOSITION (folia-tools)] overriding old http://schema.org/version (v2.5.7 -> 2.5.7) [CODEMETA COMPOSITION (folia-tools)] processed 276 new triples, total is now 294 Processing source #11 of 16 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/12-ci.foliatools.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/foliatools [CODEMETA COMPOSITION (folia-tools)] processed 1 new triples, total is now 295 Processing source #12 of 16 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/11-repostatus.foliatools.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/foliatools [CODEMETA COMPOSITION (folia-tools)] processed 1 new triples, total is now 295 Processing source #13 of 16 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/10-harvest.foliatools.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/foliatools [CODEMETA COMPOSITION (folia-tools)] overriding old http://schema.org/name (FoLiA-tools -> FoLiA tools) [CODEMETA COMPOSITION (folia-tools)] overriding old https://codemeta.github.io/terms/developmentStatus (https://w3id.org/research-technology-readiness-levels#Level8Complete -> https://w3id.org/research-technology-readiness-levels#Level9Proven) [CODEMETA COMPOSITION (folia-tools)] overriding old http://schema.org/applicationCategory (Text Processing > Linguistic -> https://vocabs.dariah.eu/tadirah/annotating) [CODEMETA COMPOSITION (folia-tools)] processed 6 new triples, total is now 297 Processing source #14 of 16 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/05-repostatus.foliatools.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/foliatools [CODEMETA COMPOSITION (folia-tools)] processed 1 new triples, total is now 297 Processing source #15 of 16 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/05-doi.foliatools.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/foliatools [CODEMETA COMPOSITION (folia-tools)] overriding old http://schema.org/identifier (folia-tools -> ) [CODEMETA COMPOSITION (folia-tools)] processed 5 new triples, total is now 301 Processing source #16 of 16 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/04-applicationSuite.foliatools.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/foliatools [CODEMETA COMPOSITION (https://tools.clariah.nl/stub/H3f43a7a3c94d632c)] processed 1 new triples, total is now 302 Remapping URI to (possibly) new identifier and version component: https://tools.clariah.nl/foliatools -> https://tools.clariah.nl/foliatools/2.5.7 [CODEMETA VALIDATION (foliatools)] done [CODEMETA ENRICHMENT (foliatools)] automatically adding programmingLanguage Python derived from runtimePlatform Python [CODEMETA ENRICHMENT (foliatools)] automatically adding programmingLanguage Python derived from runtimePlatform Python [CODEMETA ENRICHMENT (foliatools)] automatically adding programmingLanguage Python derived from runtimePlatform Python [CODEMETA ENRICHMENT (foliatools)] automatically adding programmingLanguage Python derived from runtimePlatform Python [CODEMETA ENRICHMENT (foliatools)] automatically adding programmingLanguage Python derived from runtimePlatform Python [CODEMETA ENRICHMENT (foliatools)] automatically adding programmingLanguage Python derived from runtimePlatform Python [CODEMETA ENRICHMENT (foliatools)] automatically adding programmingLanguage Python derived from runtimePlatform Python [CODEMETA ENRICHMENT (foliatools)] adding author https://tools.clariah.nl/person/maarten-van-gompel as contributor [CODEMETA ENRICHMENT (foliatools)] adding affiliation(s) of first author as producer VALIDATION https://tools.clariah.nl/foliatools/2.5.7 #1: Info: Reference publications *SHOULD* be expressed, if any (This is missing in the metadata) VALIDATION https://tools.clariah.nl/foliatools/2.5.7 #2: Info: The funder *SHOULD* be acknowledged (This is missing in the metadata) -- end log -- [harvester info] Output written to /tmp/out/foliatools.codemeta.json [harvester info] <-- Finished processing foliatools (https://github.com/proycon/foliatools) [Wed Sep 18 03:07:09 UTC 2024]