(log file starts at Wed Sep 18 03:09:58 UTC 2024) [harvester info] --> Processing int-pie (https://github.com/INL/int-pie) [Wed Sep 18 03:09:58 UTC 2024] [harvester info] Git updating cached clone of https://github.com/INL/int-pie... [harvester info] Found release 1.0.0 [harvester info] Using '1.0.0' [harvester info] Git reference: 1.0.0 [harvester info] Scanning directory /tmp/codemeta-harvester.cache/int-pie for harvestable resources... [harvester info] found codemeta-harvest.json for int-pie (md5sum 8af3b438fca4abebb74c08b111abe6ef); values in here take precendence over (override) those in later detection stages [harvester info] found python setup for int-pie, converting to codemeta -- begin log -- No input files specified, but found python project (setup.py) in current dir, using that... Generating egg_info Traceback (most recent call last): File "/tmp/codemeta-harvester.cache/int-pie/setup.py", line 52, in with open(os.path.join(here, project_slug, '__version__.py')) as f: ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ FileNotFoundError: [Errno 2] No such file or directory: '/tmp/codemeta-harvester.cache/int-pie/int_pie/__version__.py' Traceback (most recent call last): File "/usr/bin/codemetapy", line 8, in sys.exit(main()) ^^^^^^ File "/usr/lib/python3.12/site-packages/codemeta/codemeta.py", line 335, in main g, res, args, contextgraph = build(**args.__dict__) ^^^^^^^^^^^^^^^^^^^^^^ File "/usr/lib/python3.12/site-packages/codemeta/codemeta.py", line 592, in build raise Exception( Exception: Could not generate egg_info (is python3 pointing to the right interpreter?) -- end log -- [harvester error] python setup.py to codemeta conversion failed for int-pie (codemetapy failed) [harvester info] Looking for license.... [harvester info] Found license MIT [harvester info] Getting contributors from git... [harvester info] No git contributors found [harvester info] Getting top contributor from git... [harvester info] Git top contributor will be assigned as author (and maintainer) if none are found in the metadata [harvester info] Extracting last and first commit date from git log.... [harvester info] Date created: 2018-04-25T15:52:42Z+0200, date modified: 2024-06-05T15:51:23Z+0200 [harvester info] Querying Github/GitLab API (https://github.com/INL/int-pie) [harvester info] Adding URL for found README: README.md [harvester info] Found releaseNotes [harvester info] Querying Zenodo API for DOI (access token provided)... [harvester info] Looking for TRL information in README.md... [harvester info] Mapping repostatus https://www.repostatus.org/#wip to trl:Stage3Experimental [harvester info] Looking for repostatus information in README.md... [harvester info] Looking for continuous integration information in README.md... [harvester info] Looking for documentation links in README.md... [harvester info] Falling back to git tag (1.0.0) if no version number is specified... [harvester info] Inferring repostatus information from git activity (used only as a fallback if not explicitly provided)... [harvester info] Inferred repostatus https://www.repostatus.org/#active [harvester info] Looking for repostatus information in README.md in master branch... [harvester info] Setting group GaLAHaD [harvester info] Reconciliating: codemetapy --baseuri https://tools.clariah.nl --baseuri https://tools.clariah.nl --includecontext --addcontext https://w3id.org/nwo-research-fields --addcontext https://w3id.org/research-technology-readiness-levels --addcontextgraph https://vocabs.dariah.eu/rest/v1/tadirah/data?format=text/turtle --trl --identifier "int-pie" --codeRepository "https://github.com/INL/int-pie" --validate /etc/software.ttl --released --enrich --textv "Please consult the CLARIAH Software Metadata Requirements at https://github.com/CLARIAH/clariah-plus/blob/main/requirements/software-metadata-requirements.md for an in-depth explanation of any found problems" -O /tmp/out/int-pie.codemeta.json /tmp/codemeta-harvester.cache//tmp/99-version.int-pie.codemeta.json /tmp/codemeta-harvester.cache//tmp/99-repostatus.int-pie.codemeta.json /tmp/codemeta-harvester.cache//tmp/90-authors.int-pie.codemeta.json /tmp/codemeta-harvester.cache//tmp/43-releasenotes.int-pie.codemeta.json /tmp/codemeta-harvester.cache//tmp/41-readme.int-pie.codemeta.json /tmp/codemeta-harvester.cache//tmp/40-gitapi.int-pie.codemeta.json /tmp/codemeta-harvester.cache//tmp/39-gitdate.int-pie.codemeta.json /tmp/codemeta-harvester.cache//tmp/29-license.int-pie.codemeta.json /tmp/codemeta-harvester.cache//tmp/11-trl.int-pie.codemeta.json /tmp/codemeta-harvester.cache//tmp/10-harvest.int-pie.codemeta.json /tmp/codemeta-harvester.cache//tmp/04-applicationSuite.int-pie.codemeta.json -- begin log -- Passed 11 files/sources but specified 0 input types! Automatically guessing types... Detected input types: [('/tmp/codemeta-harvester.cache//tmp/99-version.int-pie.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/99-repostatus.int-pie.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/90-authors.int-pie.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/43-releasenotes.int-pie.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/41-readme.int-pie.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/40-gitapi.int-pie.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/39-gitdate.int-pie.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/29-license.int-pie.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/11-trl.int-pie.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/10-harvest.int-pie.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/04-applicationSuite.int-pie.codemeta.json', 'json')] Adding to contextgraph: /tmp/turtle Initial URI automatically generated, may be overriden later: https://tools.clariah.nl/int-pie Processing source #1 of 11 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/99-version.int-pie.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/int-pie [CODEMETA COMPOSITION (https://tools.clariah.nl/int-pie)] processed 1 new triples, total is now 2 Processing source #2 of 11 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/99-repostatus.int-pie.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/int-pie [CODEMETA COMPOSITION (https://tools.clariah.nl/int-pie)] processed 1 new triples, total is now 3 Processing source #3 of 11 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/90-authors.int-pie.codemeta.json Found main resource with URI https://tools.clariah.nl/int-pie.topcontributor/snapshot Injected (possibly temporary) URI https://tools.clariah.nl/int-pie [CODEMETA COMPOSITION (https://tools.clariah.nl/int-pie)] processed 1 new triples, total is now 3 Processing source #4 of 11 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/43-releasenotes.int-pie.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/int-pie [CODEMETA COMPOSITION (https://tools.clariah.nl/int-pie)] processed 2 new triples, total is now 5 Processing source #5 of 11 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/41-readme.int-pie.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/int-pie [CODEMETA COMPOSITION (https://tools.clariah.nl/int-pie)] processed 1 new triples, total is now 6 Processing source #6 of 11 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/40-gitapi.int-pie.codemeta.json Found main resource with URI https://tools.clariah.nl/int-pie/snapshot Injected (possibly temporary) URI https://tools.clariah.nl/int-pie [CODEMETA COMPOSITION (https://tools.clariah.nl/int-pie)] processed 13 new triples, total is now 18 Processing source #7 of 11 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/39-gitdate.int-pie.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/int-pie [CODEMETA COMPOSITION (https://tools.clariah.nl/int-pie)] overriding old http://schema.org/dateCreated (2024-04-19T07:44:21Z -> 2018-04-25T15:52:42Z+0200) [CODEMETA COMPOSITION (https://tools.clariah.nl/int-pie)] overriding old http://schema.org/dateModified (2024-06-25T12:22:51Z -> 2024-06-05T15:51:23Z+0200) [CODEMETA COMPOSITION (https://tools.clariah.nl/int-pie)] processed 2 new triples, total is now 18 Processing source #8 of 11 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/29-license.int-pie.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/int-pie [CODEMETA COMPOSITION (https://tools.clariah.nl/int-pie)] overriding old http://schema.org/license (http://spdx.org/licenses/MIT -> MIT) [CODEMETA CORRECTION (https://tools.clariah.nl/int-pie)] automatically converting license to spdx URI [CODEMETA COMPOSITION (https://tools.clariah.nl/int-pie)] processed 1 new triples, total is now 18 Processing source #9 of 11 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/11-trl.int-pie.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/int-pie [CODEMETA COMPOSITION (https://tools.clariah.nl/int-pie)] processed 1 new triples, total is now 19 Processing source #10 of 11 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/10-harvest.int-pie.codemeta.json Injected (possibly temporary) URI https://tools.clariah.nl/int-pie [CODEMETA COMPOSITION (int-pie)] overriding old http://schema.org/dateCreated (2018-04-25T15:52:42Z+0200 -> 2024-05-31) [CODEMETA COMPOSITION (int-pie)] overriding old http://schema.org/codeRepository (https://github.com/INL/int-pie -> git+https://github.com/INL/int-pie.git) [CODEMETA COMPOSITION (int-pie)] overriding old http://schema.org/description (https://github.com/emanjavacas/pie with custom modifications -> The PIE tagger with custom modifications by the Dutch Language Institute (INT).) [CODEMETA COMPOSITION (int-pie)] overriding old http://schema.org/downloadUrl (https://github.com/INL/int-pie/archive/refs/tags/1.0.0.zip -> https://github.com/INL/int-pie) [CODEMETA COMPOSITION (int-pie)] overriding old https://codemeta.github.io/terms/developmentStatus (https://w3id.org/research-technology-readiness-levels#Stage3Experimental -> https://w3id.org/research-technology-readiness-levels#Level8Complete) [CODEMETA COMPOSITION (int-pie)] overriding old http://schema.org/producer (https://tools.clariah.nl/org/dutch-language-institute -> https://www.ivdnt.org) [CODEMETA COMPOSITION (int-pie)] overriding old https://codemeta.github.io/terms/readme (https://github.com/INL/int-pie/blob/1.0.0//README.md -> https://github.com/INL/int-pie/blob/release/README.md) [CODEMETA COMPOSITION (int-pie)] overriding old http://schema.org/releaseNotes (https://github.com/INL/int-pie/releases/tag/1.0.0 -> https://github.com/INL/int-pie/releases) [CODEMETA COMPOSITION (int-pie)] processed 240 new triples, total is now 246 Processing source #11 of 11 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/04-applicationSuite.int-pie.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/int-pie [CODEMETA COMPOSITION (int-pie)] processed 1 new triples, total is now 247 Remapping URI to (possibly) new identifier and version component: https://tools.clariah.nl/int-pie -> https://tools.clariah.nl/int-pie/1.0.0 [CODEMETA VALIDATION (int-pie)] done VALIDATION https://tools.clariah.nl/int-pie/1.0.0 #1: Info: Software source code *SHOULD* link to a continuous integration service that builds the software and runs the software's tests (This is missing in the metadata) VALIDATION https://tools.clariah.nl/int-pie/1.0.0 #2: Info: An interface type *SHOULD* be expressed: Software source code should define one or more target products that are the resulting software applications offering specific interfaces (The metadata does express this currently, but something is wrong in the way it is expressed. Is the type/class valid?) VALIDATION https://tools.clariah.nl/int-pie/1.0.0 #3: Info: An interface type *SHOULD* be expressed: Software source code should define one or more target products that are the resulting software applications offering specific interfaces (The metadata does express this currently, but something is wrong in the way it is expressed. Is the type/class valid?) VALIDATION https://tools.clariah.nl/int-pie/1.0.0 #4: Info: An interface type *SHOULD* be expressed: Software source code should define one or more target products that are the resulting software applications offering specific interfaces (The metadata does express this currently, but something is wrong in the way it is expressed. Is the type/class valid?) VALIDATION https://tools.clariah.nl/int-pie/1.0.0 #5: Warning: Documentation *SHOULD* be expressed (This is missing in the metadata) VALIDATION https://tools.clariah.nl/int-pie/1.0.0 #6: Info: Reference publications *SHOULD* be expressed, if any (This is missing in the metadata) VALIDATION https://tools.clariah.nl/int-pie/1.0.0 #7: Info: The funder *SHOULD* be acknowledged (This is missing in the metadata) -- end log -- [harvester info] Output written to /tmp/out/int-pie.codemeta.json [harvester info] <-- Finished processing int-pie (https://github.com/INL/int-pie) [Wed Sep 18 03:10:09 UTC 2024]