(log file starts at Wed Sep 18 03:17:30 UTC 2024) [harvester info] --> Processing stam (https://github.com/annotation/stam) [Wed Sep 18 03:17:30 UTC 2024] [harvester info] Git updating cached clone of https://github.com/annotation/stam... [harvester info] Found release v1.1.0 [harvester info] Using 'v1.1.0' [harvester info] Git reference: v1.1.0 [harvester info] Scanning directory /tmp/codemeta-harvester.cache/stam for harvestable resources... [harvester info] found codemeta-harvest.json for stam (md5sum e892bb9a9ee183702e914f9033c926e4); values in here take precendence over (override) those in later detection stages [harvester info] Looking for license.... [harvester info] No license file found [harvester info] Getting contributors from git... [harvester info] No git contributors found [harvester info] Getting top contributor from git... [harvester info] Git top contributor will be assigned as author (and maintainer) if none are found in the metadata [harvester info] Extracting last and first commit date from git log.... [harvester info] Date created: 2021-09-09T17:02:05Z+0200, date modified: 2024-08-23T14:08:40Z+0200 [harvester info] Querying Github/GitLab API (https://github.com/annotation/stam) [harvester info] Adding URL for found README: README.md [harvester info] Found releaseNotes [harvester info] Querying Zenodo API for DOI (access token provided)... [harvester info] Found DOI https://doi.org/10.5281/zenodo.13502362 [harvester info] Looking for TRL information in README.md... [harvester info] Found TRL https://w3id.org/research-technology-readiness-levels#Level7ReleaseCandidate [harvester info] Looking for repostatus information in README.md... [harvester info] Found repostatus https://www.repostatus.org/#active [harvester info] Looking for continuous integration information in README.md... [harvester info] Looking for documentation links in README.md... [harvester info] Falling back to git tag (v1.1.0) if no version number is specified... [harvester info] Inferring repostatus information from git activity (used only as a fallback if not explicitly provided)... [harvester info] Inferred repostatus https://www.repostatus.org/#active [harvester info] Looking for repostatus information in README.md in master branch... [harvester info] Found repostatus (master branch) https://www.repostatus.org/#active [harvester info] Setting group STAM [harvester info] Reconciliating: codemetapy --baseuri https://tools.clariah.nl --baseuri https://tools.clariah.nl --includecontext --addcontext https://w3id.org/nwo-research-fields --addcontext https://w3id.org/research-technology-readiness-levels --addcontextgraph https://vocabs.dariah.eu/rest/v1/tadirah/data?format=text/turtle --trl --identifier "stam" --codeRepository "https://github.com/annotation/stam" --validate /etc/software.ttl --released --enrich --textv "Please consult the CLARIAH Software Metadata Requirements at https://github.com/CLARIAH/clariah-plus/blob/main/requirements/software-metadata-requirements.md for an in-depth explanation of any found problems" -O /tmp/out/stam.codemeta.json /tmp/codemeta-harvester.cache//tmp/99-version.stam.codemeta.json /tmp/codemeta-harvester.cache//tmp/99-repostatus.stam.codemeta.json /tmp/codemeta-harvester.cache//tmp/90-authors.stam.codemeta.json /tmp/codemeta-harvester.cache//tmp/43-releasenotes.stam.codemeta.json /tmp/codemeta-harvester.cache//tmp/41-readme.stam.codemeta.json /tmp/codemeta-harvester.cache//tmp/40-gitapi.stam.codemeta.json /tmp/codemeta-harvester.cache//tmp/39-gitdate.stam.codemeta.json /tmp/codemeta-harvester.cache//tmp/11-trl.stam.codemeta.json /tmp/codemeta-harvester.cache//tmp/11-repostatus.stam.codemeta.json /tmp/codemeta-harvester.cache//tmp/10-harvest.stam.codemeta.json /tmp/codemeta-harvester.cache//tmp/05-repostatus.stam.codemeta.json /tmp/codemeta-harvester.cache//tmp/05-doi.stam.codemeta.json /tmp/codemeta-harvester.cache//tmp/04-applicationSuite.stam.codemeta.json -- begin log -- Passed 13 files/sources but specified 0 input types! Automatically guessing types... Detected input types: [('/tmp/codemeta-harvester.cache//tmp/99-version.stam.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/99-repostatus.stam.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/90-authors.stam.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/43-releasenotes.stam.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/41-readme.stam.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/40-gitapi.stam.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/39-gitdate.stam.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/11-trl.stam.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/11-repostatus.stam.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/10-harvest.stam.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/05-repostatus.stam.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/05-doi.stam.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/04-applicationSuite.stam.codemeta.json', 'json')] Adding to contextgraph: /tmp/turtle Initial URI automatically generated, may be overriden later: https://tools.clariah.nl/stam Processing source #1 of 13 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/99-version.stam.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/stam [CODEMETA COMPOSITION (https://tools.clariah.nl/stam)] processed 1 new triples, total is now 2 Processing source #2 of 13 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/99-repostatus.stam.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/stam [CODEMETA COMPOSITION (https://tools.clariah.nl/stam)] processed 1 new triples, total is now 3 Processing source #3 of 13 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/90-authors.stam.codemeta.json Found main resource with URI https://tools.clariah.nl/stam.topcontributor/snapshot Injected (possibly temporary) URI https://tools.clariah.nl/stam [CODEMETA COMPOSITION (https://tools.clariah.nl/stam)] processed 1 new triples, total is now 3 Processing source #4 of 13 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/43-releasenotes.stam.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/stam [CODEMETA COMPOSITION (https://tools.clariah.nl/stam)] processed 2 new triples, total is now 5 Processing source #5 of 13 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/41-readme.stam.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/stam [CODEMETA COMPOSITION (https://tools.clariah.nl/stam)] processed 1 new triples, total is now 6 Processing source #6 of 13 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/40-gitapi.stam.codemeta.json Found main resource with URI https://tools.clariah.nl/stam/snapshot Injected (possibly temporary) URI https://tools.clariah.nl/stam [CODEMETA COMPOSITION (https://tools.clariah.nl/stam)] processed 21 new triples, total is now 26 Processing source #7 of 13 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/39-gitdate.stam.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/stam [CODEMETA COMPOSITION (https://tools.clariah.nl/stam)] overriding old http://schema.org/dateCreated (2022-09-19T16:27:57Z -> 2021-09-09T17:02:05Z+0200) [CODEMETA COMPOSITION (https://tools.clariah.nl/stam)] overriding old http://schema.org/dateModified (2024-08-29T15:51:29Z -> 2024-08-23T14:08:40Z+0200) [CODEMETA COMPOSITION (https://tools.clariah.nl/stam)] processed 2 new triples, total is now 26 Processing source #8 of 13 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/11-trl.stam.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/stam [CODEMETA COMPOSITION (https://tools.clariah.nl/stam)] processed 1 new triples, total is now 27 Processing source #9 of 13 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/11-repostatus.stam.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/stam [CODEMETA COMPOSITION (https://tools.clariah.nl/stam)] processed 1 new triples, total is now 27 Processing source #10 of 13 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/10-harvest.stam.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/stam [CODEMETA COMPOSITION (https://tools.clariah.nl/stam)] overriding old http://schema.org/producer (https://tools.clariah.nl/org/annotation -> https://tools.clariah.nl/stub/H-34794d2431ad6342) [CODEMETA COMPOSITION (https://tools.clariah.nl/stam)] overriding old https://codemeta.github.io/terms/developmentStatus (https://w3id.org/research-technology-readiness-levels#Level7ReleaseCandidate -> https://w3id.org/research-technology-readiness-levels#Stage3Experimental) [CODEMETA COMPOSITION (https://tools.clariah.nl/stam)] overriding old http://schema.org/url (https://annotation.github.io/stam/ -> https://annotation.github.io/stam) [CODEMETA COMPOSITION (https://tools.clariah.nl/stam)] processed 18 new triples, total is now 41 Processing source #11 of 13 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/05-repostatus.stam.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/stam [CODEMETA COMPOSITION (https://tools.clariah.nl/stam)] processed 1 new triples, total is now 41 Processing source #12 of 13 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/05-doi.stam.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/stam [CODEMETA COMPOSITION (https://tools.clariah.nl/stam)] processed 5 new triples, total is now 46 Processing source #13 of 13 Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/04-applicationSuite.stam.codemeta.json NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically... Injected (possibly temporary) URI https://tools.clariah.nl/stam [CODEMETA COMPOSITION (https://tools.clariah.nl/stam)] processed 1 new triples, total is now 47 Remapping URI to (possibly) new identifier and version component: https://tools.clariah.nl/stam -> https://tools.clariah.nl/stam/v1.1.0 [CODEMETA VALIDATION (stam)] author not set [CODEMETA VALIDATION (stam)] done VALIDATION https://tools.clariah.nl/stam/v1.1.0 #1: Violation: The authors of the software source code *MUST* be expressed. (This is missing in the metadata) VALIDATION https://tools.clariah.nl/stam/v1.1.0 #2: Violation: The maintainer of the software source code *MUST* be expressed. (This is missing in the metadata) VALIDATION https://tools.clariah.nl/stam/v1.1.0 #3: Info: Software source code *SHOULD* link to a continuous integration service that builds the software and runs the software's tests (This is missing in the metadata) VALIDATION https://tools.clariah.nl/stam/v1.1.0 #4: Info: Software source code *MAY* express the programming language(s) used (This is missing in the metadata) VALIDATION https://tools.clariah.nl/stam/v1.1.0 #5: Warning: All contributors *SHOULD* be expressed (This is missing in the metadata) VALIDATION https://tools.clariah.nl/stam/v1.1.0 #6: Info: An interface type *SHOULD* be expressed: Software source code should define one or more target products that are the resulting software applications offering specific interfaces (This is missing in the metadata) VALIDATION https://tools.clariah.nl/stam/v1.1.0 #7: Warning: Documentation *SHOULD* be expressed (This is missing in the metadata) VALIDATION https://tools.clariah.nl/stam/v1.1.0 #8: Info: Reference publications *SHOULD* be expressed, if any (This is missing in the metadata) -- end log -- [harvester info] Output written to /tmp/out/stam.codemeta.json [harvester info] <-- Finished processing stam (https://github.com/annotation/stam) [Wed Sep 18 03:17:39 UTC 2024]