(log file starts at Wed Apr 22 03:16:52 UTC 2026)

[harvester info] --> Processing pure3d (https://github.com/CLARIAH/pure3d) [Wed Apr 22 03:16:52 UTC 2026]

[harvester info] Git updating cached clone of https://github.com/CLARIAH/pure3d...

[harvester info] No releases found, falling back to default git branch!

[harvester info] Using 'main'

[harvester info] Git reference: main

[harvester info] Scanning directory /tmp/codemeta-harvester.cache/pure3d for harvestable resources...

[harvester info] found python setup for pure3d, converting to codemeta

-- begin log --

No input files specified, but found python project (pyproject.toml) in current dir, using that...

Adding to contextgraph: /tmp/turtle

Initial URI automatically generated, may be overriden later: https://tools.clariah.nl/pyproject-toml

Processing source #1 of 1

Obtaining python package metadata for: pyproject.toml

Loading metadata from pyproject.toml via pyproject-parser

Traceback (most recent call last):

  File "/usr/bin/codemetapy", line 8, in <module>

    sys.exit(main())

             ^^^^^^

  File "/usr/lib/python3.12/site-packages/codemeta/codemeta.py", line 339, in main

    g, res, args, contextgraph = build(**args.__dict__)

                                 ^^^^^^^^^^^^^^^^^^^^^^

  File "/usr/lib/python3.12/site-packages/codemeta/codemeta.py", line 660, in build

    codemeta.parsers.python.parse_python(newgraph, res, source, crosswalk, args)

  File "/usr/lib/python3.12/site-packages/codemeta/parsers/python.py", line 386, in parse_python

    if value.startswith("http"):

       ^^^^^^^^^^^^^^^^

AttributeError: 'Readme' object has no attribute 'startswith'

-- end log --

[harvester error] python setup.py to codemeta conversion failed for pure3d (codemetapy failed)

[harvester info] Looking for license....

[harvester info] Found license MIT

[harvester info] Getting contributors from git...

[harvester info] Getting top contributor from git...

[harvester info] Git top contributor Dirk Roorda <dirk.roorda@di.huc.knaw.nl> will be assigned as author (and maintainer) if none are found in the metadata

[harvester info] Extracting last and first commit date from git log....

[harvester info] Date created: 2022-04-19T12:58:54Z+0200, date modified: 2024-12-11T17:07:59Z+0100

[harvester info] Querying Github/GitLab API (https://github.com/CLARIAH/pure3d)

[harvester info] Adding URL for found README: README.md

[harvester info] Looking for TRL information in README.md...

[harvester info] Looking for repostatus information in README.md...

[harvester info] Found repostatus https://www.repostatus.org/#moved

[harvester info] Looking for continuous integration information in README.md...

[harvester info] Looking for documentation links in README.md...

[harvester info] Inferring repostatus information from git activity (used only as a fallback if not explicitly provided)...

[harvester info] Inferred repostatus https://www.repostatus.org/#suspended

[harvester info] Reconciliating: codemetapy  --baseuri https://tools.clariah.nl --baseuri https://tools.clariah.nl --includecontext --addcontext https://w3id.org/nwo-research-fields --addcontext https://w3id.org/research-technology-readiness-levels --addcontextgraph https://vocabs.dariah.eu/rest/v1/tadirah/data?format=text/turtle --trl --identifier "pure3d" --codeRepository "https://github.com/CLARIAH/pure3d" --validate /etc/software.ttl --enrich --textv "Please consult the CLARIAH Software Metadata Requirements at https://github.com/CLARIAH/clariah-plus/blob/main/requirements/software-metadata-requirements.md for an in-depth explanation of any found problems" -O /tmp/out/pure3d.codemeta.json /tmp/codemeta-harvester.cache//tmp/99-repostatus.pure3d.codemeta.json /tmp/codemeta-harvester.cache//tmp/90-authors.pure3d.codemeta.json /tmp/codemeta-harvester.cache//tmp/41-readme.pure3d.codemeta.json /tmp/codemeta-harvester.cache//tmp/40-gitapi.pure3d.codemeta.json /tmp/codemeta-harvester.cache//tmp/39-gitdate.pure3d.codemeta.json /tmp/codemeta-harvester.cache//tmp/32-contributors.pure3d.codemeta.json /tmp/codemeta-harvester.cache//tmp/29-license.pure3d.codemeta.json /tmp/codemeta-harvester.cache//tmp/11-repostatus.pure3d.codemeta.json 

-- begin log --

Passed 8 files/sources but specified 0 input types! Automatically guessing types...

Detected input types: [('/tmp/codemeta-harvester.cache//tmp/99-repostatus.pure3d.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/90-authors.pure3d.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/41-readme.pure3d.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/40-gitapi.pure3d.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/39-gitdate.pure3d.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/32-contributors.pure3d.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/29-license.pure3d.codemeta.json', 'json'), ('/tmp/codemeta-harvester.cache//tmp/11-repostatus.pure3d.codemeta.json', 'json')]

Adding to contextgraph: /tmp/turtle

Initial URI automatically generated, may be overriden later: https://tools.clariah.nl/pure3d

Processing source #1 of 8

Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/99-repostatus.pure3d.codemeta.json

    NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically...

    Injected (possibly temporary) URI https://tools.clariah.nl/pure3d

[CODEMETA COMPOSITION (https://tools.clariah.nl/pure3d)] processed 1 new triples, total is now 2

Processing source #2 of 8

Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/90-authors.pure3d.codemeta.json

    Found main resource with URI https://tools.clariah.nl/pure3d.topcontributor/snapshot

    Injected (possibly temporary) URI https://tools.clariah.nl/pure3d

[CODEMETA COMPOSITION (https://tools.clariah.nl/pure3d)] processed 8 new triples, total is now 9

Processing source #3 of 8

Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/41-readme.pure3d.codemeta.json

    NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically...

    Injected (possibly temporary) URI https://tools.clariah.nl/pure3d

[CODEMETA COMPOSITION (https://tools.clariah.nl/pure3d)] processed 1 new triples, total is now 10

Processing source #4 of 8

Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/40-gitapi.pure3d.codemeta.json

    Found main resource with URI https://tools.clariah.nl/pure3d/snapshot

    Injected (possibly temporary) URI https://tools.clariah.nl/pure3d

[CODEMETA COMPOSITION (https://tools.clariah.nl/pure3d)] overriding old https://codemeta.github.io/terms/developmentStatus (https://www.repostatus.org/#suspended -> https://www.repostatus.org/#unsupported)

[CODEMETA COMPOSITION (https://tools.clariah.nl/pure3d)] processed 19 new triples, total is now 27

Processing source #5 of 8

Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/39-gitdate.pure3d.codemeta.json

    NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically...

    Injected (possibly temporary) URI https://tools.clariah.nl/pure3d

[CODEMETA COMPOSITION (https://tools.clariah.nl/pure3d)] overriding old http://schema.org/dateCreated (2022-04-19T10:58:53Z -> 2022-04-19T12:58:54Z+0200)

[CODEMETA COMPOSITION (https://tools.clariah.nl/pure3d)] overriding old http://schema.org/dateModified (2024-12-11T16:08:03Z -> 2024-12-11T17:07:59Z+0100)

[CODEMETA COMPOSITION (https://tools.clariah.nl/pure3d)] processed 2 new triples, total is now 27

Processing source #6 of 8

Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/32-contributors.pure3d.codemeta.json

    Found main resource with URI https://tools.clariah.nl/pure3d.contributors/snapshot

    Injected (possibly temporary) URI https://tools.clariah.nl/pure3d

[CODEMETA COMPOSITION (https://tools.clariah.nl/pure3d)] processed 26 new triples, total is now 48

Processing source #7 of 8

Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/29-license.pure3d.codemeta.json

    NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically...

    Injected (possibly temporary) URI https://tools.clariah.nl/pure3d

[CODEMETA COMPOSITION (https://tools.clariah.nl/pure3d)] overriding old http://schema.org/license (http://spdx.org/licenses/MIT -> MIT)

[CODEMETA CORRECTION (https://tools.clariah.nl/pure3d)] automatically converting license to spdx URI

[CODEMETA COMPOSITION (https://tools.clariah.nl/pure3d)] processed 1 new triples, total is now 48

Processing source #8 of 8

Parsing json-ld file from /tmp/codemeta-harvester.cache//tmp/11-repostatus.pure3d.codemeta.json

    NOTE: Not a valid JSON-LD document, @context missing! Attempting to inject automatically...

    Injected (possibly temporary) URI https://tools.clariah.nl/pure3d

[CODEMETA COMPOSITION (https://tools.clariah.nl/pure3d)] overriding old https://codemeta.github.io/terms/developmentStatus (https://www.repostatus.org/#unsupported -> https://www.repostatus.org/#moved)

[CODEMETA COMPOSITION (https://tools.clariah.nl/pure3d)] processed 1 new triples, total is now 48

Remapping URI to (possibly) new identifier and version component: https://tools.clariah.nl/pure3d -> https://tools.clariah.nl/pure3d/snapshot

[CODEMETA VALIDATION (pure3d)] done

[CODEMETA ENRICHMENT (pure3d)] considering first author as maintainer

VALIDATION https://tools.clariah.nl/pure3d/snapshot #1: Violation: Software source code *MUST* state its version (This is missing in the metadata)

VALIDATION https://tools.clariah.nl/pure3d/snapshot #2: Info: Software source code *SHOULD* link to a continuous integration service that builds the software and runs the software's tests (This is missing in the metadata)

VALIDATION https://tools.clariah.nl/pure3d/snapshot #3: Info: Software source code *MAY* express the programming language(s) used (This is missing in the metadata)

VALIDATION https://tools.clariah.nl/pure3d/snapshot #4: Info: An interface type *SHOULD* be expressed: Software source code should define one or more target products that are the resulting software applications offering specific interfaces (This is missing in the metadata)

VALIDATION https://tools.clariah.nl/pure3d/snapshot #5: Warning: Documentation *SHOULD* be expressed (This is missing in the metadata)

VALIDATION https://tools.clariah.nl/pure3d/snapshot #6: Info: Reference publications *SHOULD* be expressed, if any (This is missing in the metadata)

VALIDATION https://tools.clariah.nl/pure3d/snapshot #7: Info: The funder *SHOULD* be acknowledged (This is missing in the metadata)

VALIDATION https://tools.clariah.nl/pure3d/snapshot #8: Info: The technology readiness level *SHOULD* be expressed (This is missing in the metadata)

VALIDATION https://tools.clariah.nl/pure3d/snapshot #9: Info: A research domain *SHOULD* be expressed as a category using the NWO Research Fields vocabulary, if applicable (This is missing in the metadata)

VALIDATION https://tools.clariah.nl/pure3d/snapshot #10: Info: A research activity *SHOULD* be expressed as a category using the TaDiRaH vocabulary (This is missing in the metadata)

-- end log --

[harvester info] Output written to /tmp/out/pure3d.codemeta.json

[harvester info] <-- Finished processing pure3d (https://github.com/CLARIAH/pure3d) [Wed Apr 22 03:17:04 UTC 2026]